STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9K824_ACYPIUncharacterized protein. (494 aa)    
Predicted Functional Partners:
J9K5X8_ACYPI
PRK domain-containing protein.
      
 0.637
ACYPI007555
ACYPI007555 protein.
      
 0.621
J9K416_ACYPI
PUM-HD domain-containing protein.
      
 0.489
X1WIF4_ACYPI
Uncharacterized protein.
      
 0.441
J9JW09_ACYPI
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
   
    0.436
J9L0U2_ACYPI
Ima1_N domain-containing protein.
   
  
 0.432
X1WN30_ACYPI
Uncharacterized protein.
   
    0.429
X1WRN4_ACYPI
Uncharacterized protein.
   
    0.429
J9K0W3_ACYPI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.405
J9M0U5_ACYPI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.405
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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