J9KDR2_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9KDR2_ACYPI

Integrase catalytic domain-containing protein. (550 aa)

Predicted Functional Partners:

X1XTY3_ACYPI

0.509

X1WWF4_ACYPI

0.507

X1X096_ACYPI

0.504

X1WZC6_ACYPI

0.503

J9M6I7_ACYPI

0.501

X1WR08_ACYPI

0.499

X1XR65_ACYPI

0.499

J9JL40_ACYPI

0.490

X1XU24_ACYPI

0.490

J9LQI0_ACYPI

0.489

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J9JL40_ACYPI	J9KDR2_ACYPI	J9JL40	J9KDR2	DUF1758 domain-containing protein.	Integrase catalytic domain-containing protein.	0.490
J9KDR2_ACYPI	J9JL40_ACYPI	J9KDR2	J9JL40	Integrase catalytic domain-containing protein.	DUF1758 domain-containing protein.	0.490
J9KDR2_ACYPI	J9LQI0_ACYPI	J9KDR2	J9LQI0	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.489
J9KDR2_ACYPI	J9M6I7_ACYPI	J9KDR2	J9M6I7	Integrase catalytic domain-containing protein.	DUF1758 domain-containing protein.	0.501
J9KDR2_ACYPI	X1WR08_ACYPI	J9KDR2	X1WR08	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.499
J9KDR2_ACYPI	X1WWF4_ACYPI	J9KDR2	X1WWF4	Integrase catalytic domain-containing protein.	DUF1758 domain-containing protein.	0.507
J9KDR2_ACYPI	X1WZC6_ACYPI	J9KDR2	X1WZC6	Integrase catalytic domain-containing protein.	DUF1758 domain-containing protein.	0.503
J9KDR2_ACYPI	X1X096_ACYPI	J9KDR2	X1X096	Integrase catalytic domain-containing protein.	DUF1758 domain-containing protein.	0.504
J9KDR2_ACYPI	X1XR65_ACYPI	J9KDR2	X1XR65	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.499
J9KDR2_ACYPI	X1XTY3_ACYPI	J9KDR2	X1XTY3	Integrase catalytic domain-containing protein.	DUF1758 domain-containing protein.	0.509
J9KDR2_ACYPI	X1XU24_ACYPI	J9KDR2	X1XU24	Integrase catalytic domain-containing protein.	DUF1758 domain-containing protein.	0.490
J9LQI0_ACYPI	J9KDR2_ACYPI	J9LQI0	J9KDR2	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.489
J9M6I7_ACYPI	J9KDR2_ACYPI	J9M6I7	J9KDR2	DUF1758 domain-containing protein.	Integrase catalytic domain-containing protein.	0.501
X1WR08_ACYPI	J9KDR2_ACYPI	X1WR08	J9KDR2	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.499
X1WWF4_ACYPI	J9KDR2_ACYPI	X1WWF4	J9KDR2	DUF1758 domain-containing protein.	Integrase catalytic domain-containing protein.	0.507
X1WZC6_ACYPI	J9KDR2_ACYPI	X1WZC6	J9KDR2	DUF1758 domain-containing protein.	Integrase catalytic domain-containing protein.	0.503
X1X096_ACYPI	J9KDR2_ACYPI	X1X096	J9KDR2	DUF1758 domain-containing protein.	Integrase catalytic domain-containing protein.	0.504
X1XR65_ACYPI	J9KDR2_ACYPI	X1XR65	J9KDR2	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.499
X1XTY3_ACYPI	J9KDR2_ACYPI	X1XTY3	J9KDR2	DUF1758 domain-containing protein.	Integrase catalytic domain-containing protein.	0.509
X1XU24_ACYPI	J9KDR2_ACYPI	X1XU24	J9KDR2	DUF1758 domain-containing protein.	Integrase catalytic domain-containing protein.	0.490