J9LBF9_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9LBF9_ACYPI

Uncharacterized protein. (389 aa)

Predicted Functional Partners:

J9JLT1_ACYPI

0.777

J9JW08_ACYPI

0.757

X1XT01_ACYPI

0.757

J9K1G4_ACYPI

0.680

X1WSM3_ACYPI

0.610

J9K3K4_ACYPI

0.601

J9K495_ACYPI

0.573

ACYPI000079

0.560

Rpl14

0.553

J9JKS5_ACYPI

0.551

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYPI000079	J9K495_ACYPI	Q201W9	J9K495	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
ACYPI000079	J9LBF9_ACYPI	Q201W9	J9LBF9	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.560
ACYPI000079	Rpl14	Q201W9	Q201X6	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal protein L14-like.	0.999
J9JKS5_ACYPI	J9LBF9_ACYPI	J9JKS5	J9LBF9	LisH domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.551
J9JKS5_ACYPI	X1WSM3_ACYPI	J9JKS5	X1WSM3	LisH domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.880
J9JLT1_ACYPI	J9K1G4_ACYPI	J9JLT1	J9K1G4	Uncharacterized protein.	Uncharacterized protein.	0.400
J9JLT1_ACYPI	J9LBF9_ACYPI	J9JLT1	J9LBF9	Uncharacterized protein.	Uncharacterized protein.	0.777
J9JW08_ACYPI	J9K3K4_ACYPI	J9JW08	J9K3K4	WSC domain-containing protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.750
J9JW08_ACYPI	J9LBF9_ACYPI	J9JW08	J9LBF9	WSC domain-containing protein.	Uncharacterized protein.	0.757
J9JW08_ACYPI	X1WSM3_ACYPI	J9JW08	X1WSM3	WSC domain-containing protein.	Uncharacterized protein.	0.587
J9K1G4_ACYPI	J9JLT1_ACYPI	J9K1G4	J9JLT1	Uncharacterized protein.	Uncharacterized protein.	0.400
J9K1G4_ACYPI	J9LBF9_ACYPI	J9K1G4	J9LBF9	Uncharacterized protein.	Uncharacterized protein.	0.680
J9K3K4_ACYPI	J9JW08_ACYPI	J9K3K4	J9JW08	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	WSC domain-containing protein.	0.750
J9K3K4_ACYPI	J9LBF9_ACYPI	J9K3K4	J9LBF9	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	Uncharacterized protein.	0.601
J9K3K4_ACYPI	X1WSM3_ACYPI	J9K3K4	X1WSM3	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	Uncharacterized protein.	0.427
J9K3K4_ACYPI	X1XT01_ACYPI	J9K3K4	X1XT01	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	Uncharacterized protein.	0.750
J9K495_ACYPI	ACYPI000079	J9K495	Q201W9	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
J9K495_ACYPI	J9LBF9_ACYPI	J9K495	J9LBF9	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.573
J9K495_ACYPI	Rpl14	J9K495	Q201X6	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Ribosomal protein L14-like.	0.999
J9LBF9_ACYPI	ACYPI000079	J9LBF9	Q201W9	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.560