J9LD18_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9LD18_ACYPI

DUF4371 domain-containing protein. (502 aa)

Predicted Functional Partners:

J9KL71_ACYPI

0.432

J9L1Q4_ACYPI

0.425

J9L090_ACYPI

0.422

J9LCF8_ACYPI

0.418

X1XGQ0_ACYPI

0.413

J9KZ67_ACYPI

0.405

X1WJE9_ACYPI

0.401

J9KKA4_ACYPI

0.400

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J9KKA4_ACYPI	J9LD18_ACYPI	J9KKA4	J9LD18	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.400
J9KL71_ACYPI	J9LD18_ACYPI	J9KL71	J9LD18	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.432
J9KZ67_ACYPI	J9LD18_ACYPI	J9KZ67	J9LD18	Uncharacterized protein.	DUF4371 domain-containing protein.	0.405
J9KZ67_ACYPI	X1WJE9_ACYPI	J9KZ67	X1WJE9	Uncharacterized protein.	Uncharacterized protein.	0.401
J9L090_ACYPI	J9LD18_ACYPI	J9L090	J9LD18	Uncharacterized protein.	DUF4371 domain-containing protein.	0.422
J9L1Q4_ACYPI	J9LD18_ACYPI	J9L1Q4	J9LD18	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.425
J9L1Q4_ACYPI	X1WJE9_ACYPI	J9L1Q4	X1WJE9	DUF4371 domain-containing protein.	Uncharacterized protein.	0.401
J9LCF8_ACYPI	J9LD18_ACYPI	J9LCF8	J9LD18	Uncharacterized protein.	DUF4371 domain-containing protein.	0.418
J9LD18_ACYPI	J9KKA4_ACYPI	J9LD18	J9KKA4	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.400
J9LD18_ACYPI	J9KL71_ACYPI	J9LD18	J9KL71	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.432
J9LD18_ACYPI	J9KZ67_ACYPI	J9LD18	J9KZ67	DUF4371 domain-containing protein.	Uncharacterized protein.	0.405
J9LD18_ACYPI	J9L090_ACYPI	J9LD18	J9L090	DUF4371 domain-containing protein.	Uncharacterized protein.	0.422
J9LD18_ACYPI	J9L1Q4_ACYPI	J9LD18	J9L1Q4	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.425
J9LD18_ACYPI	J9LCF8_ACYPI	J9LD18	J9LCF8	DUF4371 domain-containing protein.	Uncharacterized protein.	0.418
J9LD18_ACYPI	X1WJE9_ACYPI	J9LD18	X1WJE9	DUF4371 domain-containing protein.	Uncharacterized protein.	0.401
J9LD18_ACYPI	X1XGQ0_ACYPI	J9LD18	X1XGQ0	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.413
X1WJE9_ACYPI	J9KZ67_ACYPI	X1WJE9	J9KZ67	Uncharacterized protein.	Uncharacterized protein.	0.401
X1WJE9_ACYPI	J9L1Q4_ACYPI	X1WJE9	J9L1Q4	Uncharacterized protein.	DUF4371 domain-containing protein.	0.401
X1WJE9_ACYPI	J9LD18_ACYPI	X1WJE9	J9LD18	Uncharacterized protein.	DUF4371 domain-containing protein.	0.401
X1XGQ0_ACYPI	J9LD18_ACYPI	X1XGQ0	J9LD18	DUF4371 domain-containing protein.	DUF4371 domain-containing protein.	0.413