STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X1WJ63_ACYPIWW domain-containing protein. (533 aa)    
Predicted Functional Partners:
J9JUI4_ACYPI
Uncharacterized protein.
   
 
 0.897
J9JRQ1_ACYPI
E3 ubiquitin protein ligase.
   
 0.891
J9KA25_ACYPI
Uncharacterized protein.
   
 
 0.887
X1X363_ACYPI
CPSF_A domain-containing protein.
    
 
 0.799
J9JSZ3_ACYPI
Uncharacterized protein.
   
   0.773
J9KAY6_ACYPI
Glutamate dehydrogenase.
   
 
 0.768
J9JLR1_ACYPI
C3H1-type domain-containing protein.
    
 
 0.726
J9JLY1_ACYPI
U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.
    
 
 0.726
J9JTL9_ACYPI
Uncharacterized protein.
    
 
 0.714
J9K3Z9_ACYPI
CCHC-type domain-containing protein.
    
 
 0.714
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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