STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X1WJI6_ACYPINUC173 domain-containing protein. (1264 aa)    
Predicted Functional Partners:
J9JM85_ACYPI
Uncharacterized protein.
   
 
 0.999
J9K4S6_ACYPI
Uncharacterized protein.
   
 
 0.999
J9JMM0_ACYPI
Bms1-type G domain-containing protein.
   
 
 0.998
X1WI54_ACYPI
Uncharacterized protein.
   
 
 0.998
J9JKX3_ACYPI
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.996
J9JX20_ACYPI
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.995
J9JZA9_ACYPI
Nop domain-containing protein.
   
 
 0.992
J9KB16_ACYPI
Bms1-type G domain-containing protein.
   
 
 0.991
J9K486_ACYPI
Uncharacterized protein.
   
 
 0.990
J9JTI6_ACYPI
RIO domain-containing protein.
   
 
 0.988
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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