STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOX05500.1threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (689 aa)    
Predicted Functional Partners:
AOX06228.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.962
AOX05445.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.955
AOX06567.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.946
AOX04821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.946
AOX05437.1
Translation initiation factor IF-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.945
AOX05654.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.944
AOX05967.1
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.941
AOX06301.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.930
AOX06217.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.922
AOX06262.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.915
Your Current Organism:
Corynebacterium sp. NML980116
NCBI taxonomy Id: 702967
Other names: C. sp. NML98-0116, Corynebacterium sp. NML98-0116
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