STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT60180.1Uncharacterised protein. (70 aa)    
Predicted Functional Partners:
SBT60177.1
Uncharacterised protein.
       0.773
SBT60178.1
Conserved phage C-terminus (Phg_2220_C).
       0.773
SBT60179.1
Replication protein P.
       0.773
SBT60181.1
Uncharacterised protein.
       0.773
SBT60182.1
Uncharacterised protein.
       0.773
SBT60175.1
DNA-binding transcriptional regulator DicC.
       0.746
SBT60176.1
Uncharacterised protein.
       0.746
SBT60183.1
Protein of uncharacterised function (DUF968).
       0.581
SBT60184.1
Uncharacterised protein.
       0.581
SBT60174.1
Uncharacterized HTH-type transcriptional regulator CBU_1416.
       0.525
Your Current Organism:
Plesiomonas shigelloides
NCBI taxonomy Id: 703
Other names: ATCC 14029, Aeromonas shigelloides, CCUG 410, CDC 3085-55, CIP 63.5, DSM 8224, Fergusonia shigelloides, LMG 4242, LMG:4242, NCCB 80007, NCIB 9242, NCIMB 9242, NCTC 10360, P. shigelloides, Pleisomonas shigelloides, Pseudomonas shigelloides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.