Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cph2_2 | nqrB_1 | SAMEA2665130_01303 | SAMEA2665130_01299 | Bacteriophytochrome cph2. | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.492 |
| cph2_2 | rnfA | SAMEA2665130_01303 | SAMEA2665130_01302 | Bacteriophytochrome cph2. | Electron transport complex protein rnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.526 |
| cph2_2 | rnfB | SAMEA2665130_01303 | SAMEA2665130_01301 | Bacteriophytochrome cph2. | Nitrogen fixation protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.526 |
| cph2_2 | rnfC | SAMEA2665130_01303 | SAMEA2665130_01300 | Bacteriophytochrome cph2. | Nitrogen fixation protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.500 |
| cph2_2 | rnfE | SAMEA2665130_01303 | SAMEA2665130_01297 | Bacteriophytochrome cph2. | Electron transport complex protein rnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.453 |
| cph2_2 | rnfG | SAMEA2665130_01303 | SAMEA2665130_01298 | Bacteriophytochrome cph2. | Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.480 |
| fdxA | rnfB | SAMEA2665130_01199 | SAMEA2665130_01301 | Ferredoxin I; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Nitrogen fixation protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.741 |
| nqrB_1 | cph2_2 | SAMEA2665130_01299 | SAMEA2665130_01303 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Bacteriophytochrome cph2. | 0.492 |
| nqrB_1 | nqrE | SAMEA2665130_01299 | SAMEA2665130_02265 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | 0.822 |
| nqrB_1 | nth | SAMEA2665130_01299 | SAMEA2665130_01296 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.919 |
| nqrB_1 | ratB | SAMEA2665130_01299 | SAMEA2665130_02447 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Uncharacterised protein family (UPF0125); Belongs to the UPF0125 (RnfH) family. | 0.722 |
| nqrB_1 | rnfA | SAMEA2665130_01299 | SAMEA2665130_01302 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Electron transport complex protein rnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.993 |
| nqrB_1 | rnfB | SAMEA2665130_01299 | SAMEA2665130_01301 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Nitrogen fixation protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.991 |
| nqrB_1 | rnfC | SAMEA2665130_01299 | SAMEA2665130_01300 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Nitrogen fixation protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.998 |
| nqrB_1 | rnfE | SAMEA2665130_01299 | SAMEA2665130_01297 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Electron transport complex protein rnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.998 |
| nqrB_1 | rnfG | SAMEA2665130_01299 | SAMEA2665130_01298 | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.999 |
| nqrE | nqrB_1 | SAMEA2665130_02265 | SAMEA2665130_01299 | Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | Na(+)-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.822 |
| nqrE | rnfB | SAMEA2665130_02265 | SAMEA2665130_01301 | Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | Nitrogen fixation protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.624 |
| nqrE | rnfC | SAMEA2665130_02265 | SAMEA2665130_01300 | Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | Nitrogen fixation protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.626 |
| nqrE | rnfG | SAMEA2665130_02265 | SAMEA2665130_01298 | Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.480 |
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