Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBT60425.1 | actP | SAMEA2665130_00887 | SAMEA2665130_02820 | Hypoxic response protein 1. | Acetate transporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.878 |
| SBT60425.1 | polC_2 | SAMEA2665130_00887 | SAMEA2665130_02817 | Hypoxic response protein 1. | DNA polymerase III polC-type. | 0.932 |
| SBT60425.1 | yjcH | SAMEA2665130_00887 | SAMEA2665130_02819 | Hypoxic response protein 1. | Inner membrane protein yjcH. | 0.761 |
| SBT62243.1 | acs | SAMEA2665130_02816 | SAMEA2665130_02818 | Predicted signal-transduction protein containing cAMP-binding and CBS domains. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.648 |
| SBT62243.1 | actP | SAMEA2665130_02816 | SAMEA2665130_02820 | Predicted signal-transduction protein containing cAMP-binding and CBS domains. | Acetate transporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.953 |
| SBT62243.1 | polC_2 | SAMEA2665130_02816 | SAMEA2665130_02817 | Predicted signal-transduction protein containing cAMP-binding and CBS domains. | DNA polymerase III polC-type. | 0.985 |
| SBT62243.1 | yjcH | SAMEA2665130_02816 | SAMEA2665130_02819 | Predicted signal-transduction protein containing cAMP-binding and CBS domains. | Inner membrane protein yjcH. | 0.916 |
| aceA | aceB | SAMEA2665130_00552 | SAMEA2665130_00551 | Isocitrate lyase. | Malate synthase A; Belongs to the malate synthase family. | 0.999 |
| aceA | acs | SAMEA2665130_00552 | SAMEA2665130_02818 | Isocitrate lyase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.589 |
| aceA | actP | SAMEA2665130_00552 | SAMEA2665130_02820 | Isocitrate lyase. | Acetate transporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.412 |
| aceA | fadB | SAMEA2665130_00552 | SAMEA2665130_03048 | Isocitrate lyase. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.787 |
| aceA | yjcH | SAMEA2665130_00552 | SAMEA2665130_02819 | Isocitrate lyase. | Inner membrane protein yjcH. | 0.422 |
| aceB | aceA | SAMEA2665130_00551 | SAMEA2665130_00552 | Malate synthase A; Belongs to the malate synthase family. | Isocitrate lyase. | 0.999 |
| aceB | acs | SAMEA2665130_00551 | SAMEA2665130_02818 | Malate synthase A; Belongs to the malate synthase family. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.984 |
| aceB | fadB | SAMEA2665130_00551 | SAMEA2665130_03048 | Malate synthase A; Belongs to the malate synthase family. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.871 |
| aceB | mmsA | SAMEA2665130_00551 | SAMEA2665130_00882 | Malate synthase A; Belongs to the malate synthase family. | Methylmalonate-semialdehyde dehydrogenase [acylating]. | 0.818 |
| aceB | yjcH | SAMEA2665130_00551 | SAMEA2665130_02819 | Malate synthase A; Belongs to the malate synthase family. | Inner membrane protein yjcH. | 0.817 |
| acs | SBT62243.1 | SAMEA2665130_02818 | SAMEA2665130_02816 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Predicted signal-transduction protein containing cAMP-binding and CBS domains. | 0.648 |
| acs | aceA | SAMEA2665130_02818 | SAMEA2665130_00552 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Isocitrate lyase. | 0.589 |
| acs | aceB | SAMEA2665130_02818 | SAMEA2665130_00551 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Malate synthase A; Belongs to the malate synthase family. | 0.984 |
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