STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT62357.1Uncharacterised protein. (200 aa)    
Predicted Functional Partners:
SBT60511.1
Protein of uncharacterised function (DUF539).
  
     0.659
SBT61251.1
Cbb3-type cytochrome oxidase, subunit 3.
  
     0.575
glnL
Nitrogen regulation protein NR(II).
       0.548
SBT60419.1
Protein of uncharacterised function (DUF2802).
  
     0.529
SBT62177.1
Sel1 repeat.
  
     0.520
SBT60108.1
Uncharacterised protein.
  
     0.511
glnA
Glutamine synthetase.
       0.480
SBT62148.1
Protein of uncharacterised function (DUF2806).
  
     0.470
SBT60241.1
Predicted membrane protein.
  
     0.465
SBT61246.1
Protein of uncharacterised function (DUF3581).
  
     0.430
Your Current Organism:
Plesiomonas shigelloides
NCBI taxonomy Id: 703
Other names: ATCC 14029, Aeromonas shigelloides, CCUG 410, CDC 3085-55, CIP 63.5, DSM 8224, Fergusonia shigelloides, LMG 4242, LMG:4242, NCCB 80007, NCIB 9242, NCIMB 9242, NCTC 10360, P. shigelloides, Pleisomonas shigelloides, Pseudomonas shigelloides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.