A0A2A9N7U9 protein (Amanita thiersii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2A9N7U9

Uncharacterized protein. (602 aa)

Predicted Functional Partners:

A0A2A9NSZ6

0.995

A0A2A9NUP8

0.995

A0A2A9NK43

0.991

A0A2A9NKD1

0.991

A0A2A9NSH2

0.991

A0A2A9NXC9

0.991

A0A2A9NYG9

0.991

A0A2A9N995

0.990

A0A2A9NKY9

0.990

A0A2A9P1K7

0.990

Your Current Organism:

Amanita thiersii

NCBI taxonomy Id: 703135
Other names: A. thiersii Skay4041, Amanita thiersii Skay4041

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2A9N7U9	A0A2A9N995	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.990
A0A2A9N7U9	A0A2A9NK43	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.991
A0A2A9N7U9	A0A2A9NKD1	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A2A9N7U9	A0A2A9NKY9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.990
A0A2A9N7U9	A0A2A9NSH2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.991
A0A2A9N7U9	A0A2A9NSZ6	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A2A9N7U9	A0A2A9NUP8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.995
A0A2A9N7U9	A0A2A9NXC9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.	0.991
A0A2A9N7U9	A0A2A9NYG9	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A2A9N7U9	A0A2A9P1K7	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A2A9N995	A0A2A9N7U9	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.990
A0A2A9N995	A0A2A9NK43	Ribosomal_S10 domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A2A9N995	A0A2A9NKD1	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
A0A2A9N995	A0A2A9NKY9	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
A0A2A9N995	A0A2A9NSH2	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.998
A0A2A9N995	A0A2A9NSZ6	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
A0A2A9N995	A0A2A9NUP8	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A2A9N995	A0A2A9NXC9	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.	0.999
A0A2A9N995	A0A2A9NYG9	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
A0A2A9N995	A0A2A9P1K7	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.991