A0A2A9NIZ3 protein (Amanita thiersii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2A9NIZ3

Zn(2)-C6 fungal-type domain-containing protein. (286 aa)

Predicted Functional Partners:

A0A2A9NQ56

0.722

A0A2A9NQ76

0.721

A0A2A9NC20

0.719

A0A2A9NZB9

0.715

A0A2A9NZI6

0.660

A0A2A9NWM4

0.653

A0A2A9NKP1

0.648

A0A2A9NQ78

0.648

A0A2A9NRS4

0.613

A0A2A9NTM7

0.613

Your Current Organism:

Amanita thiersii

NCBI taxonomy Id: 703135
Other names: A. thiersii Skay4041, Amanita thiersii Skay4041

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2A9NC20	A0A2A9NIZ3	SWIB domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.719
A0A2A9NC20	A0A2A9NKP1	SWIB domain-containing protein.	Uncharacterized protein.	0.968
A0A2A9NC20	A0A2A9NQ56	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.985
A0A2A9NC20	A0A2A9NQ76	SWIB domain-containing protein.	Uncharacterized protein.	0.995
A0A2A9NC20	A0A2A9NQ78	SWIB domain-containing protein.	Uncharacterized protein.	0.970
A0A2A9NC20	A0A2A9NRS4	SWIB domain-containing protein.	F-box domain-containing protein.	0.891
A0A2A9NC20	A0A2A9NTM7	SWIB domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.891
A0A2A9NC20	A0A2A9NZB9	SWIB domain-containing protein.	Uncharacterized protein.	0.997
A0A2A9NC20	A0A2A9NZI6	SWIB domain-containing protein.	Uncharacterized protein.	0.991
A0A2A9NIZ3	A0A2A9NC20	Zn(2)-C6 fungal-type domain-containing protein.	SWIB domain-containing protein.	0.719
A0A2A9NIZ3	A0A2A9NKP1	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.648
A0A2A9NIZ3	A0A2A9NQ56	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.722
A0A2A9NIZ3	A0A2A9NQ76	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.721
A0A2A9NIZ3	A0A2A9NQ78	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.648
A0A2A9NIZ3	A0A2A9NRS4	Zn(2)-C6 fungal-type domain-containing protein.	F-box domain-containing protein.	0.613
A0A2A9NIZ3	A0A2A9NTM7	Zn(2)-C6 fungal-type domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.613
A0A2A9NIZ3	A0A2A9NWM4	Zn(2)-C6 fungal-type domain-containing protein.	SWIB domain-containing protein.	0.653
A0A2A9NIZ3	A0A2A9NZB9	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.715
A0A2A9NIZ3	A0A2A9NZI6	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.660
A0A2A9NKP1	A0A2A9NC20	Uncharacterized protein.	SWIB domain-containing protein.	0.968