STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)    
Predicted Functional Partners:
A0A2A9NCL1
Uncharacterized protein.
  
 
 0.997
A0A2A9NAJ9
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.996
A0A2A9NJ66
Ribosomal_L7Ae domain-containing protein.
   
 
 0.995
A0A2A9NTA2
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.990
A0A2A9NIS4
Uncharacterized protein.
  
 
 0.989
A0A2A9NJC5
Ribosomal_L16 domain-containing protein.
   
 
 0.988
AMATHDRAFT_908
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.988
A0A2A9NZS3
KOW domain-containing protein.
  
 
 0.988
A0A2A9P0Z4
TRASH domain-containing protein.
   
 
 0.988
A0A2A9N6I4
Ribosomal_L7Ae domain-containing protein.
   
 
 0.987
Your Current Organism:
Amanita thiersii
NCBI taxonomy Id: 703135
Other names: A. thiersii Skay4041, Amanita thiersii Skay4041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.