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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_00167TetR/AcrR family transcriptional regulator. (248 aa)    
Predicted Functional Partners:
F897_00168
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.900
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.773
F897_00165
TonB-dependent receptor.
       0.652
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.646
F897_01930
Uncharacterized protein.
 
     0.642
F897_00163
Biopolymer transporter ExbD.
       0.637
F897_00164
MotA/TolQ/ExbB proton channel family protein.
       0.637
F897_01186
Uncharacterized protein.
  
     0.625
F897_01185
Uncharacterized protein.
  
     0.608
F897_01184
Peptidase C39 domain-containing protein.
  
     0.594
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.