STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_00221Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
F897_00224
Rieske domain-containing protein.
 
 0.993
F897_00225
Uncharacterized protein.
 
 
 0.981
F897_00223
Uncharacterized protein.
 
 0.979
F897_01351
4Fe-4S Mo/W bis-MGD-type domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.961
F897_00920
Glutamine amidotransferase type-2 domain-containing protein.
    
 0.885
fdx
Ferredoxin, 2Fe-2S type, ISC system protein.
  
 0.870
F897_00222
LigB domain-containing protein.
       0.865
F897_01341
Carnitine monooxygenase reductase subunit; Converts carnitine to trimethylamine and malic semialdehyde.
 
 0.864
F897_01211
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 0.846
F897_01800
FAD-binding FR-type domain-containing protein.
  
 0.846
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.