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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_00392Uncharacterized protein. (154 aa)    
Predicted Functional Partners:
F897_02168
FA_desaturase domain-containing protein.
  
     0.667
F897_01801
FA_desaturase domain-containing protein.
  
     0.666
F897_01794
Carrier domain-containing protein.
  
 
 0.650
F897_02169
Uncharacterized protein.
 
 
  0.630
F897_01799
HTH tetR-type domain-containing protein.
  
     0.623
F897_01800
FAD-binding FR-type domain-containing protein.
 
 
  0.617
F897_00391
HTH tetR-type domain-containing protein.
  
    0.610
F897_00820
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.572
F897_00500
HTH tetR-type domain-containing protein.
  
     0.570
F897_01395
O-acyltransferase WSD.
  
     0.569
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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