STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_00668UTP--glucose-1-phosphate uridylyltransferase. (291 aa)    
Predicted Functional Partners:
F897_00669
UDP-glucose 6-dehydrogenase.
 
 0.994
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.993
F897_01284
Uncharacterized protein.
   
 0.969
F897_00672
Uncharacterized protein.
   
 0.957
F897_02042
UDP-glucose 4-epimerase.
 
  
 0.943
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.923
F897_01373
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
    
 0.916
F897_00667
Polysacc_synt_2 domain-containing protein.
  
 
 0.858
F897_00664
Bac_transf domain-containing protein.
    
 0.823
F897_00663
Uncharacterized protein.
 
  
 0.814
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.