Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F897_00920 | F897_00921 | F897_00920 | F897_00921 | Glutamine amidotransferase type-2 domain-containing protein. | Glutamate synthase [NADPH] small chain. | 0.999 |
F897_00920 | F897_01351 | F897_00920 | F897_01351 | Glutamine amidotransferase type-2 domain-containing protein. | 4Fe-4S Mo/W bis-MGD-type domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.990 |
F897_00920 | F897_01521 | F897_00920 | F897_01521 | Glutamine amidotransferase type-2 domain-containing protein. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.999 |
F897_00920 | F897_01572 | F897_00920 | F897_01572 | Glutamine amidotransferase type-2 domain-containing protein. | Uncharacterized protein. | 0.999 |
F897_00920 | F897_02303 | F897_00920 | F897_02303 | Glutamine amidotransferase type-2 domain-containing protein. | Uncharacterized protein. | 0.999 |
F897_00920 | F897_02367 | F897_00920 | F897_02367 | Glutamine amidotransferase type-2 domain-containing protein. | Glu_synthase domain-containing protein; Belongs to the glutamate synthase family. | 0.995 |
F897_00920 | carB | F897_00920 | F897_02889 | Glutamine amidotransferase type-2 domain-containing protein. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.974 |
F897_00920 | glmS | F897_00920 | F897_00678 | Glutamine amidotransferase type-2 domain-containing protein. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.966 |
F897_00920 | glnA | F897_00920 | F897_01608 | Glutamine amidotransferase type-2 domain-containing protein. | Glutamine synthetase. | 0.992 |
F897_00920 | guaA | F897_00920 | F897_00735 | Glutamine amidotransferase type-2 domain-containing protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.984 |
F897_00921 | F897_00920 | F897_00921 | F897_00920 | Glutamate synthase [NADPH] small chain. | Glutamine amidotransferase type-2 domain-containing protein. | 0.999 |
F897_00921 | F897_01351 | F897_00921 | F897_01351 | Glutamate synthase [NADPH] small chain. | 4Fe-4S Mo/W bis-MGD-type domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.490 |
F897_00921 | F897_01521 | F897_00921 | F897_01521 | Glutamate synthase [NADPH] small chain. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.950 |
F897_00921 | F897_02367 | F897_00921 | F897_02367 | Glutamate synthase [NADPH] small chain. | Glu_synthase domain-containing protein; Belongs to the glutamate synthase family. | 0.989 |
F897_00921 | carB | F897_00921 | F897_02889 | Glutamate synthase [NADPH] small chain. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.906 |
F897_00921 | glmS | F897_00921 | F897_00678 | Glutamate synthase [NADPH] small chain. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.905 |
F897_00921 | glnA | F897_00921 | F897_01608 | Glutamate synthase [NADPH] small chain. | Glutamine synthetase. | 0.937 |
F897_01351 | F897_00920 | F897_01351 | F897_00920 | 4Fe-4S Mo/W bis-MGD-type domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Glutamine amidotransferase type-2 domain-containing protein. | 0.990 |
F897_01351 | F897_00921 | F897_01351 | F897_00921 | 4Fe-4S Mo/W bis-MGD-type domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Glutamate synthase [NADPH] small chain. | 0.490 |
F897_01351 | F897_01572 | F897_01351 | F897_01572 | 4Fe-4S Mo/W bis-MGD-type domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Uncharacterized protein. | 0.635 |
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