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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_01094Uncharacterized protein. (2715 aa)    
Predicted Functional Partners:
F897_01274
FtsK domain-containing protein.
    
 
 0.917
F897_01345
Autotransporter domain-containing protein.
  
 0.870
F897_00717
Catalase.
  
 0.735
F897_01093
Uncharacterized protein.
       0.732
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.730
F897_00114
Tail-specific protease; Belongs to the peptidase S41A family.
   
  0.721
F897_00830
TSPc domain-containing protein.
   
  0.721
F897_03303
Uncharacterized protein.
   
  0.721
F897_01236
Uncharacterized protein.
    
 
 0.588
F897_01433
Uncharacterized protein.
    
 
 0.588
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.