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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_01099Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
F897_01100
UPF0234 protein EGK58_08145; Belongs to the UPF0234 family.
       0.823
F897_01101
Rhodanese domain-containing protein.
       0.723
F897_01794
Carrier domain-containing protein.
  
 
 0.650
F897_00021
Uncharacterized protein.
  
     0.621
F897_00820
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.572
F897_01516
Uncharacterized protein.
  
     0.491
F897_00335
Type II secretion system protein C.
  
     0.478
F897_00167
TetR/AcrR family transcriptional regulator.
  
     0.456
F897_00290
Uncharacterized protein.
  
     0.437
F897_00292
Uncharacterized protein.
  
     0.416
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.