F897_01920 protein (Acinetobacter variabilis)

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Score

F897_01920

HIT domain-containing protein. (144 aa)

Predicted Functional Partners:

F897_01921

0.802

mfd

0.691

rpoC

0.546

rpoZ

0.523

F897_00405

0.431

F897_00184

0.425

Your Current Organism:

Acinetobacter variabilis

NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F897_00184	F897_01920	F897_00184	F897_01920	SlyX family protein.	HIT domain-containing protein.	0.425
F897_00405	F897_01920	F897_00405	F897_01920	Uncharacterized protein.	HIT domain-containing protein.	0.431
F897_00405	F897_01921	F897_00405	F897_01921	Uncharacterized protein.	Guanylate cyclase domain-containing protein.	0.878
F897_00405	rpoC	F897_00405	F897_00317	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.418
F897_01920	F897_00184	F897_01920	F897_00184	HIT domain-containing protein.	SlyX family protein.	0.425
F897_01920	F897_00405	F897_01920	F897_00405	HIT domain-containing protein.	Uncharacterized protein.	0.431
F897_01920	F897_01921	F897_01920	F897_01921	HIT domain-containing protein.	Guanylate cyclase domain-containing protein.	0.802
F897_01920	mfd	F897_01920	F897_01919	HIT domain-containing protein.	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.	0.691
F897_01920	rpoC	F897_01920	F897_00317	HIT domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.546
F897_01920	rpoZ	F897_01920	F897_00931	HIT domain-containing protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.523
F897_01921	F897_00405	F897_01921	F897_00405	Guanylate cyclase domain-containing protein.	Uncharacterized protein.	0.878
F897_01921	F897_01920	F897_01921	F897_01920	Guanylate cyclase domain-containing protein.	HIT domain-containing protein.	0.802
F897_01921	mfd	F897_01921	F897_01919	Guanylate cyclase domain-containing protein.	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.	0.646
mfd	F897_01920	F897_01919	F897_01920	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.	HIT domain-containing protein.	0.691
mfd	F897_01921	F897_01919	F897_01921	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.	Guanylate cyclase domain-containing protein.	0.646
mfd	rpoC	F897_01919	F897_00317	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.980
mfd	rpoZ	F897_01919	F897_00931	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.950
rpoC	F897_00405	F897_00317	F897_00405	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.418
rpoC	F897_01920	F897_00317	F897_01920	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	HIT domain-containing protein.	0.546
rpoC	mfd	F897_00317	F897_01919	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.	0.980

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