Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F897_00120 | F897_01206 | F897_00120 | F897_01206 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Phenylacetic acid degradation protein paaN. | 0.848 |
| F897_00120 | F897_02137 | F897_00120 | F897_02137 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | IclR family transcriptional regulator. | 0.473 |
| F897_00120 | F897_02163 | F897_00120 | F897_02163 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Urea carboxylase. | 0.668 |
| F897_00120 | sucD | F897_00120 | F897_01475 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.937 |
| F897_01206 | F897_00120 | F897_01206 | F897_00120 | Phenylacetic acid degradation protein paaN. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.848 |
| F897_01206 | F897_02137 | F897_01206 | F897_02137 | Phenylacetic acid degradation protein paaN. | IclR family transcriptional regulator. | 0.462 |
| F897_01206 | F897_02163 | F897_01206 | F897_02163 | Phenylacetic acid degradation protein paaN. | Urea carboxylase. | 0.811 |
| F897_01206 | sucD | F897_01206 | F897_01475 | Phenylacetic acid degradation protein paaN. | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.715 |
| F897_02137 | F897_00120 | F897_02137 | F897_00120 | IclR family transcriptional regulator. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.473 |
| F897_02137 | F897_01206 | F897_02137 | F897_01206 | IclR family transcriptional regulator. | Phenylacetic acid degradation protein paaN. | 0.462 |
| F897_02137 | F897_02163 | F897_02137 | F897_02163 | IclR family transcriptional regulator. | Urea carboxylase. | 0.749 |
| F897_02137 | F897_02977 | F897_02137 | F897_02977 | IclR family transcriptional regulator. | Nitroreductase. | 0.450 |
| F897_02137 | sucD | F897_02137 | F897_01475 | IclR family transcriptional regulator. | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.403 |
| F897_02163 | F897_00120 | F897_02163 | F897_00120 | Urea carboxylase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.668 |
| F897_02163 | F897_01206 | F897_02163 | F897_01206 | Urea carboxylase. | Phenylacetic acid degradation protein paaN. | 0.811 |
| F897_02163 | F897_02137 | F897_02163 | F897_02137 | Urea carboxylase. | IclR family transcriptional regulator. | 0.749 |
| F897_02163 | sucD | F897_02163 | F897_01475 | Urea carboxylase. | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.485 |
| F897_02977 | F897_02137 | F897_02977 | F897_02137 | Nitroreductase. | IclR family transcriptional regulator. | 0.450 |
| sucD | F897_00120 | F897_01475 | F897_00120 | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.937 |
| sucD | F897_01206 | F897_01475 | F897_01206 | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Phenylacetic acid degradation protein paaN. | 0.715 |
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