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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_02148Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
F897_02147
Uncharacterized protein.
 
  
 0.976
F897_02151
ABC transporter domain-containing protein.
 
 0.952
F897_00514
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 0.929
F897_01351
4Fe-4S Mo/W bis-MGD-type domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.925
F897_01350
Nitrite reductase [NAD(P)H], large subunit.
 
 
 0.793
F897_02150
ABC transmembrane type-1 domain-containing protein.
 
 
  0.774
F897_02341
ABC transmembrane type-1 domain-containing protein.
 
 
  0.757
F897_00513
ABC transmembrane type-1 domain-containing protein.
 
 
  0.737
F897_01349
Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.698
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
      0.594
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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