Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F897_02402HTH araC/xylS-type domain-containing protein. (335 aa)    
Predicted Functional Partners:
F897_00019
HTH araC/xylS-type domain-containing protein.
  
     0.774
zapE
Cell division protein ZapE; Reduces the stability of FtsZ polymers in the presence of ATP.
       0.551
F897_00020
Uncharacterized protein.
  
     0.532
F897_02403
Uncharacterized protein.
       0.526
F897_02311
Uncharacterized protein.
  
     0.519
F897_00920
Glutamine amidotransferase type-2 domain-containing protein.
     
 0.509
F897_01269
Uncharacterized protein.
  
     0.508
F897_01822
PaaX_C domain-containing protein.
  
    0.464
F897_02224
Uncharacterized protein.
  
     0.447
F897_01578
HTH araC/xylS-type domain-containing protein.
  
     0.431
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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