STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_02538Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
F897_02537
Bac_luciferase domain-containing protein.
     0.994
F897_02536
SfnB family sulfur acquisition oxidoreductase.
 
 
  0.932
F897_02535
Acyl-CoA_dh_2 domain-containing protein.
 
 
  0.895
F897_02534
Acyl-CoA_dh_N domain-containing protein.
 
 
  0.891
F897_00412
Uncharacterized protein.
  
 
  0.786
F897_00409
Dimethyl sulfone monooxygenase SfnG.
  
    0.753
F897_00408
FMN reductase.
  
  0.751
F897_00749
Nitrilotriacetate monooxygenase component A.
  
     0.744
F897_02539
Uncharacterized protein.
       0.743
F897_02541
ABC transmembrane type-1 domain-containing protein.
       0.730
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.