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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_03005Uncharacterized protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1035 aa)    
Predicted Functional Partners:
F897_03004
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.978
F897_00629
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.887
F897_03189
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.831
F897_02949
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.778
F897_03003
Uncharacterized protein.
       0.762
F897_00089
Biotin_lipoyl_2 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.730
F897_03236
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.648
yajC
Sec translocon accessory complex subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
  
 
 
 0.620
adeK
Multidrug efflux RND transporter AdeIJK outer membrane channel subunit AdeK.
 
 
 0.563
F897_01304
HlyD_D23 domain-containing protein.
 
  
 0.537
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.