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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_03033FAD-binding FR-type domain-containing protein. (253 aa)    
Predicted Functional Partners:
F897_02625
Ferredoxin--NADP reductase.
  
  
 
0.911
F897_00224
Rieske domain-containing protein.
   
 
  0.870
F897_03034
HTH lysR-type domain-containing protein; Belongs to the LysR transcriptional regulatory family.
       0.752
F897_01800
FAD-binding FR-type domain-containing protein.
  
  
  0.663
F897_01914
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.646
F897_01209
Phenylacetate-CoA oxygenase, PaaI subunit.
  
  0.551
F897_01207
Phenylacetic acid degradation protein paaA.
   
  0.540
F897_01210
Phenylacetate-CoA oxygenase, PaaJ subunit.
  
 
 0.527
F897_01208
Phenylacetic acid degradation protein paaB.
   
 
 0.507
F897_02981
Uncharacterized protein.
     
 0.442
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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