Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F897_00075 | F897_01390 | F897_00075 | F897_01390 | HTH cro/C1-type domain-containing protein. | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.659 |
F897_00075 | F897_03060 | F897_00075 | F897_03060 | HTH cro/C1-type domain-containing protein. | Uncharacterized protein. | 0.739 |
F897_00708 | F897_03060 | F897_00708 | F897_03060 | HTH cro/C1-type domain-containing protein. | Uncharacterized protein. | 0.728 |
F897_01268 | F897_03060 | F897_01268 | F897_03060 | annotation not available | Uncharacterized protein. | 0.440 |
F897_01268 | nuoC | F897_01268 | F897_03049 | annotation not available | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.965 |
F897_01268 | tig | F897_01268 | F897_00127 | annotation not available | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.593 |
F897_01390 | F897_00075 | F897_01390 | F897_00075 | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape. | HTH cro/C1-type domain-containing protein. | 0.659 |
F897_01390 | F897_03060 | F897_01390 | F897_03060 | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Uncharacterized protein. | 0.843 |
F897_01390 | ftsA | F897_01390 | F897_00436 | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.492 |
F897_01390 | ftsZ | F897_01390 | F897_00435 | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.470 |
F897_03059 | F897_03060 | F897_03059 | F897_03060 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
F897_03060 | F897_00075 | F897_03060 | F897_00075 | Uncharacterized protein. | HTH cro/C1-type domain-containing protein. | 0.739 |
F897_03060 | F897_00708 | F897_03060 | F897_00708 | Uncharacterized protein. | HTH cro/C1-type domain-containing protein. | 0.728 |
F897_03060 | F897_01268 | F897_03060 | F897_01268 | Uncharacterized protein. | annotation not available | 0.440 |
F897_03060 | F897_01390 | F897_03060 | F897_01390 | Uncharacterized protein. | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.843 |
F897_03060 | F897_03059 | F897_03060 | F897_03059 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
F897_03060 | ftsA | F897_03060 | F897_00436 | Uncharacterized protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.454 |
F897_03060 | ftsZ | F897_03060 | F897_00435 | Uncharacterized protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.625 |
F897_03060 | nuoC | F897_03060 | F897_03049 | Uncharacterized protein. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.465 |
F897_03060 | tig | F897_03060 | F897_00127 | Uncharacterized protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.482 |
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