Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F897_03169Glutathione-dependent formaldehyde dehydrogenase. (387 aa)    
Predicted Functional Partners:
F897_02112
Uncharacterized protein.
  
 
  0.675
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
  0.634
F897_00540
Uncharacterized protein.
  
     0.630
F897_01196
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
   
 
  0.606
F897_03326
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
   
 
  0.606
F897_01637
Uncharacterized protein.
  
     0.520
F897_03310
8-amino-7-oxononanoate synthase.
  
 
 0.504
ptsP
Phosphoenolpyruvate--protein phosphotransferase.
    
 0.494
F897_00644
PKS_ER domain-containing protein.
 
  0.461
F897_01421
Dihydroxyacetone kinase, DhaK subunit.
   
  0.451
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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