Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F897_00836 | F897_00893 | F897_00836 | F897_00893 | Homoserine dehydrogenase. | Uncharacterized protein. | 0.923 |
F897_00836 | F897_01015 | F897_00836 | F897_01015 | Homoserine dehydrogenase. | Uncharacterized protein. | 0.928 |
F897_00836 | F897_01426 | F897_00836 | F897_01426 | Homoserine dehydrogenase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.963 |
F897_00836 | F897_02849 | F897_00836 | F897_02849 | Homoserine dehydrogenase. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.645 |
F897_00836 | F897_03362 | F897_00836 | F897_03362 | Homoserine dehydrogenase. | Methionine synthase. | 0.943 |
F897_00836 | ahcY | F897_00836 | F897_02848 | Homoserine dehydrogenase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.906 |
F897_00836 | metZ | F897_00836 | F897_02282 | Homoserine dehydrogenase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.939 |
F897_00893 | F897_00836 | F897_00893 | F897_00836 | Uncharacterized protein. | Homoserine dehydrogenase. | 0.923 |
F897_00893 | F897_01015 | F897_00893 | F897_01015 | Uncharacterized protein. | Uncharacterized protein. | 0.936 |
F897_00893 | F897_01426 | F897_00893 | F897_01426 | Uncharacterized protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.971 |
F897_00893 | F897_02849 | F897_00893 | F897_02849 | Uncharacterized protein. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.474 |
F897_00893 | F897_03362 | F897_00893 | F897_03362 | Uncharacterized protein. | Methionine synthase. | 0.964 |
F897_00893 | ahcY | F897_00893 | F897_02848 | Uncharacterized protein. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.911 |
F897_00893 | metZ | F897_00893 | F897_02282 | Uncharacterized protein. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.919 |
F897_01015 | F897_00836 | F897_01015 | F897_00836 | Uncharacterized protein. | Homoserine dehydrogenase. | 0.928 |
F897_01015 | F897_00893 | F897_01015 | F897_00893 | Uncharacterized protein. | Uncharacterized protein. | 0.936 |
F897_01015 | F897_01426 | F897_01015 | F897_01426 | Uncharacterized protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.973 |
F897_01015 | F897_02849 | F897_01015 | F897_02849 | Uncharacterized protein. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.732 |
F897_01015 | F897_03362 | F897_01015 | F897_03362 | Uncharacterized protein. | Methionine synthase. | 0.945 |
F897_01015 | ahcY | F897_01015 | F897_02848 | Uncharacterized protein. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.915 |
page 1 of 4