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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_03375Fe/B12 periplasmic-binding domain-containing protein. (340 aa)    
Predicted Functional Partners:
F897_03373
ABC transporter domain-containing protein.
 
 0.999
F897_03374
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
F897_03372
N-acetyltransferase domain-containing protein.
 
     0.886
F897_03376
Uncharacterized protein.
 
  
 0.841
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.674
F897_00044
Uncharacterized protein.
  
     0.624
F897_02922
Uncharacterized protein.
  
     0.607
F897_01561
AB hydrolase-1 domain-containing protein.
  
     0.574
F897_03355
MTHFR_C domain-containing protein.
  
    0.568
F897_01560
Uncharacterized protein.
  
     0.544
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.