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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_03377HTH gntR-type domain-containing protein. (226 aa)    
Predicted Functional Partners:
F897_01225
HTH gntR-type domain-containing protein.
  
     0.635
prmB
50S ribosomal protein L3 glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
    
   0.516
F897_02156
Allophanate hydrolase.
 
     0.454
F897_03372
N-acetyltransferase domain-containing protein.
       0.433
F897_03373
ABC transporter domain-containing protein.
       0.433
F897_03374
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.433
F897_03375
Fe/B12 periplasmic-binding domain-containing protein.
       0.433
F897_03376
Uncharacterized protein.
       0.433
F897_02163
Urea carboxylase.
 
     0.412
urtA
Urea ABC transporter substrate-binding protein.
 
  
  0.405
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.