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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F897_03378Chlorophyll synthesis pathway protein BchC. (352 aa)    
Predicted Functional Partners:
F897_03379
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.987
F897_03383
E1_dh domain-containing protein.
 
 
 0.922
F897_03382
Transket_pyr domain-containing protein.
 
 
 0.918
F897_03381
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 
  0.850
F897_03380
Dihydrolipoyl dehydrogenase.
    
 0.836
F897_03310
8-amino-7-oxononanoate synthase.
  
 
 0.741
F897_00644
PKS_ER domain-containing protein.
 
  0.635
F897_01421
Dihydroxyacetone kinase, DhaK subunit.
  
  0.576
ptsP
Phosphoenolpyruvate--protein phosphotransferase.
    
 0.553
F897_00700
PTS fructose transporter subunit IIBC.
   
 
  0.526
Your Current Organism:
Acinetobacter variabilis
NCBI taxonomy Id: 70346
Other names: A. variabilis, Acinetobacter genomosp. 15, Acinetobacter genomospecies 15, Acinetobacter sp. 15, Acinetobacter sp. NIPH 2171, Acinetobacter variabilis Krizova et al. 2015, CCM 8555, CCUG 26390, CIP 110486, strain NIPH 2171
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