STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5S6Q3Q9Uncharacterized protein. (339 aa)    
Predicted Functional Partners:
A0A5S6R2M1
Uncharacterized protein.
    
 0.702
A0A5S6QE86
Uncharacterized protein.
    
 0.679
A0A5S6QJ94
Uncharacterized protein.
    
 0.679
A0A5S6QZY0
Uncharacterized protein.
    
  0.673
A0A0N5DDX9
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.658
A0A5S6QP42
Histone H4.
    
 0.658
A0A5S6QQG5
Uncharacterized protein.
    
 0.658
A0A5S6QU17
Uncharacterized protein.
    
  0.652
A0A5S6QHA7
Uncharacterized protein.
    
 0.641
A0A5S6QKD8
Uncharacterized protein.
    
 0.603
Your Current Organism:
Trichuris muris
NCBI taxonomy Id: 70415
Other names: T. muris
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