STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5S6Q8S9Uncharacterized protein. (1335 aa)    
Predicted Functional Partners:
A0A5S6QKJ8
Uncharacterized protein.
   
 
 0.672
A0A5S6QW17
Uncharacterized protein.
   
 
 0.672
A0A5S6Q9T4
Uncharacterized protein.
     
 0.650
A0A5S6QE51
Uncharacterized protein.
     
 0.650
A0A5S6QG37
Uncharacterized protein.
    
 0.633
A0A5S6QHN1
Uncharacterized protein.
    
 0.633
A0A5S6QSI2
Uncharacterized protein.
    
0.633
A0A5S6QGH4
Uncharacterized protein.
    
0.599
A0A5S6QTU2
Uncharacterized protein.
   
 
 0.485
A0A5S6QHY7
Uncharacterized protein.
    
 
 0.466
Your Current Organism:
Trichuris muris
NCBI taxonomy Id: 70415
Other names: T. muris
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