STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5S6R2Z4Uncharacterized protein. (374 aa)    
Predicted Functional Partners:
A0A5S6QXI4
Uncharacterized protein.
   
 
 0.950
A0A5S6R5H8
Uncharacterized protein.
   
 
 0.876
A0A5S6QH19
Uncharacterized protein.
   
 
 0.856
A0A5S6QHV1
Uncharacterized protein.
   
 
 0.856
A0A5S6R1A5
H/ACA ribonucleoprotein complex subunit.
   
 
 0.719
A0A5S6QM79
Uncharacterized protein.
   
 
  0.652
A0A5S6QNQ4
Uncharacterized protein.
   
  
 0.627
A0A5S6Q2S6
Uncharacterized protein.
   
  0.610
A0A5S6QBB9
Uncharacterized protein.
   
  0.610
A0A5S6Q9W0
Uncharacterized protein.
   
 
 0.594
Your Current Organism:
Trichuris muris
NCBI taxonomy Id: 70415
Other names: T. muris
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.