STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LYN4Zinc finger, CCCH-type. (348 aa)    
Predicted Functional Partners:
A0A090LYL7
Exoribonuclease, phosphorolytic domain 2.
    
  0.715
A0A090M2M2
5'-3' exoribonuclease 1.
    
 0.700
A0A090M8R3
NUDIX hydrolase, conserved site.
   
 0.679
Q00YW6_OSTTA
Dcp1-like decapping.
    
 0.585
A0A090M7X3
CCR4-Not complex component, Not1, C-terminal.
    
 
 0.568
A0A090LYI7
Exoribonuclease, phosphorolytic domain 2.
    
  0.551
A0A090N3I5
Exosome complex RNA-binding protein 1/RRP40/RRP4.
    
 0.536
Q015H8_OSTTA
Exosome complex component CSL4.
     
 0.531
A0A090MEH9
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.488
A0A096P9M3
14-3-3 protein, conserved site; Belongs to the 14-3-3 family.
   
  0.488
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.