STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LYQ2Carboxylesterase, type B. (390 aa)    
Predicted Functional Partners:
A0A090N449
Alpha/beta hydrolase fold-3.
  
  
 
0.915
Q00WK0_OSTTA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.902
A0A090N4Q8
Protein-S-isoprenylcysteine O-methyltransferase.
     
 0.901
A0A090M8K3
Succinate dehydrogenase/Fumarate reductase,transmembrane subunit.
     
 0.900
A0A090M8P4
CAAX amino terminal protease.
     
 0.900
A0A096P9T7
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
  0.900
Q013H0_OSTTA
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
     
  0.900
A0A096P9E8
Peptidase M28.
  
 0.559
A0A090M7E0
Armadillo-type fold.
   
  0.557
A0A090M384
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.478
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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