STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M078Snf7. (228 aa)    
Predicted Functional Partners:
A0A096PA27
Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domain.
   
 0.993
A0A090M518
MIT; Belongs to the AAA ATPase family.
   
 0.990
Q00T60_OSTTA
Snf7.
   
0.966
A0A090N2V2
Snf7.
   
 
 0.934
A0A096PAZ5
Snf7.
   
 0.928
A0A096P7V3
Uncharacterized protein.
    
 
 0.908
A0A090M6U0
Guanylate kinase.
  
 0.901
A0A090LYE0
Zinc finger, LSD1-type.
   
 0.880
A0A090LY40
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
     
 0.644
A0A096P820
EAP30.
      
 0.615
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.