STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M2Q1Cellulose-binding domain, fungal. (509 aa)    
Predicted Functional Partners:
A0A096P9N2
Small nuclear ribonucleoprotein Sm D2.
    
 0.532
A0A096P7J4
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.527
Q01EK0_OSTTA
Nucleotide-binding, alpha-beta plait.
    
 0.527
A0A096P7K8
Concanavalin A-like lectin/glucanase, subgroup.
   
 0.523
A0A096PBP8
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.516
A0A090M5R7
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
    
 0.512
A0A090M4S1
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
    
  0.504
A0A096P7C9
Small nuclear ribonucleoprotein G.
    
  0.502
A0A090M458
PHF5-like.
    
  0.443
Q015S0_OSTTA
Leucine-rich repeat, typical subtype.
  
     0.418
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.