STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M349WD40/YVTN repeat-like-containing domain. (340 aa)    
Predicted Functional Partners:
A0A090N2U4
G-protein beta WD-40 repeat.
  
 0.974
Q00U02_OSTTA
RNA polymerase II subunit A.
   
 0.968
A0A090M2V1
Cleavage/polyadenylation specificity factor, A subunit, C-terminal.
    
 0.926
A0A090N2Q4
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.926
A0A090LYB8
SPla/RYanodine receptor SPRY.
   
 0.921
A0A090M0Y8
Zinc finger, CCCH-type.
    
 0.885
A0A090M7R1
Zinc finger, CCCH-type.
    
 0.885
A0A090M494
Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term.
   
 0.882
A0A096PAQ2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.871
A0A090M681
WD40 repeat.
   
 0.868
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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