STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M365Serine/threonine-protein kinase, active site; Belongs to the protein kinase superfamily. (371 aa)    
Predicted Functional Partners:
Q00YU0_OSTTA
Cdk-activating kinase assembly factor MAT1,centre.
   
 0.999
CycH
Cyclin C; Belongs to the cyclin family.
    
 0.999
A0A090LXK1
TFIIH subunit Tfb4/p34.
    
 0.995
Q00VJ4_OSTTA
Transcription factor TFIIB, conserved site.
   
 0.993
A0A090MB65
P-loop containing nucleoside triphosphate hydrolase.
    
 0.991
A0A090M6G3
Beta2-adaptin/TBP, C-terminal domain.
    
 0.989
Q01BY1_OSTTA
Transcription factor TFIIE beta subunit,DNA-binding domain.
   
 0.987
Q017B7_OSTTA
General transcription factor IIH subunit.
   
 0.986
Q00TJ6_OSTTA
BSD.
   
 0.985
Q01FP4_OSTTA
Transcription factor TFIIE, alpha subunit.
    
 0.985
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.