STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M3C6Protein YIPF. (251 aa)    
Predicted Functional Partners:
A0A090N4P7
Cold-shock protein, DNA-binding.
   
 
 0.897
A0A096PB41
Protein YIPF.
   
 
 0.866
A0A090MB42
Protein YIPF.
   
 
 0.606
A0A096PBJ1
Yos1-like.
   
 
 0.606
A0A090LZP9
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.543
A0A096P7P2
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.543
A0A090LXX0
ATPase, AAA-type, CDC48; Belongs to the AAA ATPase family.
    
 0.527
Q01H18_OSTTA
P-loop containing nucleoside triphosphate hydrolase.
    
 0.527
A0A096P9H2
Leucine-rich repeat.
      
 0.474
A0A090M4R3
Uncharacterized protein family UPF0061.
      
 0.473
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.