STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M3F1Pheophorbide a oxygenase. (388 aa)    
Predicted Functional Partners:
A0A090MCH7
UbiA prenyltransferase family.
   
 
 0.933
A0A096P7F7
Staygreen protein.
   
 0.928
Q01GE2_OSTTA
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.920
A0A090M6T7
Short-chain dehydrogenase/reductase SDR.
   
 
 0.914
Q015J2_OSTTA
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
   
 
 0.914
A0A090MCR3
Pheophorbide a oxygenase.
     
 
0.900
Q00ZE6_OSTTA
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.
      
 0.810
Q01EJ0_OSTTA
Transketolase binding site.
   
  
 0.728
A0A090M5D6
Rad9.
      
 0.719
Q010I2_OSTTA
Riboflavin synthase-like beta-barrel.
      
 0.719
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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