STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M3J3Ornithine/putrescine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (313 aa)    
Predicted Functional Partners:
A0A096P8Y7
Argininosuccinate synthase.
  
 
 0.998
A0A096PBR8
N-acetyl-gamma-glutamyl-phosphate reductase, type 2.
  
  
 0.993
A0A090MEU1
Carbamoyl-phosphate synthase large subunit,CPSase domain.
 
 
 0.978
A0A090MEV3
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
   
 
 0.968
A0A090MB69
Fumarate lyase, conserved site.
 
  
 0.944
A0A096PC22
Pyridoxal phosphate-dependent transferase, major region, subdomain 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.937
A0A090MC47
Peptidase M20, dimerisation domain.
    
 0.936
A0A096P941
Carbamoyl-phosphate synthase, small subunit.
 
 
 0.930
A0A096PAL6
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
0.904
A0A096P8B0
Flavoprotein pyridine nucleotide cytochrome reductase.
     
 0.903
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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