STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M466P-loop containing nucleoside triphosphate hydrolase. (466 aa)    
Predicted Functional Partners:
A0A090M482
Unnamed product.
   
  0.655
Q01FJ1_OSTTA
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.640
A0A090MCX8
Eukaryotic rRNA processing.
   
 0.584
A0A096P8M8
Brix domain.
   
 
 0.573
A0A090LZE9
P-loop containing nucleoside triphosphate hydrolase.
   
  0.567
A0A090M6K6
Guanine nucleotide-binding protein-like 3,N-terminal domain.
   
  0.567
A0A090N450
Nucleolar protein 14.
   
 0.565
Q00XK3_OSTTA
Helicase, C-terminal; Belongs to the DEAD box helicase family.
  
0.555
Q014E9_OSTTA
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.549
A0A090M454
Small-subunit processome, Utp14.
   
 0.547
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.