STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M482Unnamed product. (1013 aa)    
Predicted Functional Partners:
A0A090LY39
Nucleoporin FG repeat.
   
 0.999
A0A090LYC9
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0A090LYW1
RNA-recognition motif (RRM) Nup35-type domain.
    
 0.999
A0A090M4D4
Nucleoporin FG repeat.
   
 0.999
A0A090M4K0
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0A090M4M4
WD40/YVTN repeat-like-containing domain; Belongs to the WD repeat SEC13 family.
   
 0.999
A0A090M5A1
Pleckstrin homology-like domain.
   
 0.999
A0A090M6J9
WD40/YVTN repeat-like-containing domain.
   
 0.999
A0A090M8J9
Nucleoporin Nup186/Nup192/Nup205.
   
 0.999
A0A090MA06
Nuclear protein 96.
   
 0.999
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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