STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M527Aminotransferase, class-II, pyridoxal-phosphate binding site. (442 aa)    
Predicted Functional Partners:
A0A096P809
Pyridoxal phosphate-dependent transferase, major region, subdomain 1.
 
   
 0.950
Q00V23_OSTTA
Thiolase-like, subgroup.
    
 0.930
A0A090M5E3
Thiolase-like, subgroup.
    
 0.912
A0A090M9A4
Biotin synthase/Biotin biosynthesis bifunctional protein BioAB.
 
  
 0.853
A0A090N4H0
Radical SAM.
  
  
 0.780
A0A090M1S0
Target SNARE coiled-coil domain.
  
  
 0.669
A0A090M2Y4
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.637
Q016K9_OSTTA
Polynucleotide kinase 3-phosphatase, eukaryota.
     
 0.630
A0A096P7T1
Methyltransferase type 11; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
   
  
 0.620
A0A090M7T5
ATP-NAD kinase, PpnK-type, all-beta.
      
 0.619
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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