STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M5U9Quinonprotein alcohol dehydrogenase-like superfamily. (518 aa)    
Predicted Functional Partners:
A0A090M7H3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.916
A0A090M7N4
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.916
A0A090LYG1
Unnamed product.
   
 0.759
A0A096PA61
SANT/Myb domain.
   
 0.759
Q016N7_OSTTA
DUF4477 domain-containing protein.
   
 0.759
Q019M9_OSTTA
Phox homologous domain.
   
 0.759
Q01DX1_OSTTA
Unnamed product.
   
 0.759
A0A090M4J5
Cyclin A/B/D/E; Belongs to the cyclin family.
   
 0.677
A0A090MDI4
RNA cap guanine-N2 methyltransferase.
   
 0.665
A0A090MCB6
Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily.
   
 0.655
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.